PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00397.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 228aa    MW: 26282.3 Da    PI: 4.2087
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.92e-16136220287
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 Wt++e+  L++a  e+  + +r++l+   W+ev++k+ +e ++er+ +qC+++++ l+k+ykk+k  +++  +++ss++ yf+++ea
  PIN00397.1 136 WTEHETFILLDAWGERFLKQGRKSLRSEEWQEVAEKVsQESKIERTDTQCRNRLDTLKKKYKKEKMKSGD--NGNSSKWIYFNKMEA 220
                 *************************************88999***********************99998..68999********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MDDEDGNRYP SNSYGINRQK LPVENVRYPP NVGNSQVEDD ENDIDEEDID NEEDDDDDDD  60
DEDEGGGVQR IGKDDYEYGD EDDGDDDEFD DLRHPKKRKL KTLLSSYEFA PRVPAAPASA  120
SAPKPSYGGR NPLTDWTEHE TFILLDAWGE RFLKQGRKSL RSEEWQEVAE KVSQESKIER  180
TDTQCRNRLD TLKKKYKKEK MKSGDNGNSS KWIYFNKMEA LLSSIPQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.15e-25Trihelix family protein