PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00550.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 519aa MW: 56499.8 Da PI: 7.658

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.8	1.7e-31	245	301	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk se+prsYY+Ct+ +Cpvkkkvers d+++ ei+Y+g+Hnh+ PIN00550.1 245 SDGYNWRKYGQKHVKASECPRSYYKCTHLNCPVKKKVERSF-DGHISEIVYKGQHNHD 301 7**************************************.*************7 PP
2	WRKY	104.1	7.6e-33	405	463	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYYrCt+agC+v+k+vers+ d k+v++tYeg+Hnh+ PIN00550.1 405 LDDGYKWRKYGQKVVKGNPHPRSYYRCTYAGCNVRKHVERSSVDIKAVITTYEGKHNHD 463 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MGGSAVEDGA AAQKAKPTIL VPPRGSMESL FTNGLGSLGF SPGPMTLVSS FFSEQGPFSF 60 SQLLAGAMAS PAAAKQGFLL GREEKGSNCS EDGKNSESSS GYKRNRPGNL AVAPPQQLQL 120 ESLSPLFMVP PGLSPSGLLK SPGFLSPLQS PFGMSHQQAL AHVTAQAAFS QSYMQMQAEL 180 QHSSSTSAAE PLPNPSSSAP SAPSETLSQQ TNPMPTDPDN SRIELSEVSQ SDKRVAYVAG 240 DKPASDGYNW RKYGQKHVKA SECPRSYYKC THLNCPVKKK VERSFDGHIS EIVYKGQHNH 300 DPPQANKRGK DGCSTETNRM NEAVHVSSEP ANFQTTTQEL SEHRQITSHN DETEDSVVVL 360 DDGDDDEPIA KRRSMDIGQS VPVSSHQTIT ESKIVVQTRS EVDLLDDGYK WRKYGQKVVK 420 GNPHPRSYYR CTYAGCNVRK HVERSSVDIK AVITTYEGKH NHDIPTRRHS GHGTTTNNSQ 480 RLKTQKIATT NPSLGREMDC GNKDQIPMTL QLKEEQIAA

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MGGSAVEDGA AAQKAKPTIL VPPRGSMESL FTNGLGSLGF SPGPMTLVSS FFSEQGPFSF  60
SQLLAGAMAS PAAAKQGFLL GREEKGSNCS EDGKNSESSS GYKRNRPGNL AVAPPQQLQL  120
ESLSPLFMVP PGLSPSGLLK SPGFLSPLQS PFGMSHQQAL AHVTAQAAFS QSYMQMQAEL  180
QHSSSTSAAE PLPNPSSSAP SAPSETLSQQ TNPMPTDPDN SRIELSEVSQ SDKRVAYVAG  240
DKPASDGYNW RKYGQKHVKA SECPRSYYKC THLNCPVKKK VERSFDGHIS EIVYKGQHNH  300
DPPQANKRGK DGCSTETNRM NEAVHVSSEP ANFQTTTQEL SEHRQITSHN DETEDSVVVL  360
DDGDDDEPIA KRRSMDIGQS VPVSSHQTIT ESKIVVQTRS EVDLLDDGYK WRKYGQKVVK  420
GNPHPRSYYR CTYAGCNVRK HVERSSVDIK AVITTYEGKH NHDIPTRRHS GHGTTTNNSQ  480
RLKTQKIATT NPSLGREMDC GNKDQIPMTL QLKEEQIAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-122	WRKY family protein