PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00583.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 955aa MW: 105829 Da PI: 7.0354

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.2	1.6e-28	633	683	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle l++yF++++k+AA+++gvc+T+LKriCRq+GI+RWP+Rkik++ PIN00583.1 633 EKTISLELLRQYFAGSLKEAARSIGVCPTTLKRICRQHGISRWPSRKIKKV 683 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 955 aa Download sequence
MEDGDFTPNA MPENLSDSTI DFNLMNELLY DGFWLEATNE SNFWHPAPTA HANLNSTSFN 60 FPTSETNIGT VDTNPHRANF SNETEISNFL GEPALTCLKM DEFSGSRSQN LEQAHHSVSL 120 NQSANSVAEE GQVNRRLWVG PNRNPITTNS VKKRLVQAVN CLKDTIRDKD VLIQIWIPVK 180 RGSRQVLTTN NQPFSLNPNC KNLADYRDVS ENYLFAVDTD SKEFVGLPGR VFLKKLPEWT 240 PDVRFFKREE YPCVNHAQQY DVRGSLALPV FEQGSGICLG VVEIVMTSVK VNYRPELENV 300 CKALEAVDLK SSDIRSPSSI EDRDQTYQGT LAEIKSVLKL LCDTHKLPLA QTWASCVQQS 360 KGGCQHSDEN YASCVSTIDL TCYVADPQVS GFHEACSEHH LIKSEGVVGK AFLTNQLCFA 420 EDITAFSKTE YPLAHYARVF NLCASAAIRL RSTYNGTAAD FVLEFFLPVD CKDAKDQMLL 480 VDSLSSVIQQ TCQCLRVITD QELAQETSGS ESGSTSSGRL QGEKHPKLAT SPSKESSSWI 540 MSMRHPKEKG KGVAIASGDH KEEPEGEFKA AAQWHNSGLD LHHVPTILEH EQLRHDSGTK 600 RFAEGSGNFS FTIGHYSSGA KKTSSEKRRT KTEKTISLEL LRQYFAGSLK EAARSIGVCP 660 TTLKRICRQH GISRWPSRKI KKVGHSLRKL QLVIDSVKGA DIQLGSFYNN FPELVSPNVP 720 GSSQLPKPKM SDHMQQENNQ PEGTLLSPTA SASIAPSSSG SHSSSSSFCY STGVKQSSLP 780 VAGASHGDAL PAEKTEGVLK RAWSVAELQG KEKEETKPLF RRSYSHRIIS NQVPTEAQAM 840 QKNSKQEHHV GTFRVKASFG EEKIRLSLPP HWGFKDLQRE VLRRFNIDDG SGSITLKYLD 900 DDSEWVLLTC DADLEECTDI HRSSKSRRIK LSVHQAHHPN LGSSFGSNGA SYSGF

Sequence ? help Back to Top

Protein Sequence Length: 955 aa Download sequence

MEDGDFTPNA MPENLSDSTI DFNLMNELLY DGFWLEATNE SNFWHPAPTA HANLNSTSFN  60
FPTSETNIGT VDTNPHRANF SNETEISNFL GEPALTCLKM DEFSGSRSQN LEQAHHSVSL  120
NQSANSVAEE GQVNRRLWVG PNRNPITTNS VKKRLVQAVN CLKDTIRDKD VLIQIWIPVK  180
RGSRQVLTTN NQPFSLNPNC KNLADYRDVS ENYLFAVDTD SKEFVGLPGR VFLKKLPEWT  240
PDVRFFKREE YPCVNHAQQY DVRGSLALPV FEQGSGICLG VVEIVMTSVK VNYRPELENV  300
CKALEAVDLK SSDIRSPSSI EDRDQTYQGT LAEIKSVLKL LCDTHKLPLA QTWASCVQQS  360
KGGCQHSDEN YASCVSTIDL TCYVADPQVS GFHEACSEHH LIKSEGVVGK AFLTNQLCFA  420
EDITAFSKTE YPLAHYARVF NLCASAAIRL RSTYNGTAAD FVLEFFLPVD CKDAKDQMLL  480
VDSLSSVIQQ TCQCLRVITD QELAQETSGS ESGSTSSGRL QGEKHPKLAT SPSKESSSWI  540
MSMRHPKEKG KGVAIASGDH KEEPEGEFKA AAQWHNSGLD LHHVPTILEH EQLRHDSGTK  600
RFAEGSGNFS FTIGHYSSGA KKTSSEKRRT KTEKTISLEL LRQYFAGSLK EAARSIGVCP  660
TTLKRICRQH GISRWPSRKI KKVGHSLRKL QLVIDSVKGA DIQLGSFYNN FPELVSPNVP  720
GSSQLPKPKM SDHMQQENNQ PEGTLLSPTA SASIAPSSSG SHSSSSSFCY STGVKQSSLP  780
VAGASHGDAL PAEKTEGVLK RAWSVAELQG KEKEETKPLF RRSYSHRIIS NQVPTEAQAM  840
QKNSKQEHHV GTFRVKASFG EEKIRLSLPP HWGFKDLQRE VLRRFNIDDG SGSITLKYLD  900
DDSEWVLLTC DADLEECTDI HRSSKSRRIK LSVHQAHHPN LGSSFGSNGA SYSGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein