PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00638.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

YABBY

Protein Properties

Length: 123aa MW: 13889.7 Da PI: 10.296

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	130.9	1.7e-40	9	95	82	170
YABBY 82 lksnvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + v ++s s+s+s+ +++ e pr+ p + PPekrqrvPsaynrfikeeiqrika+nP+i+hreafs+aaknWah+P+ih gl PIN00638.1 9 MAD-VAIKDSGSSSRSNRFGLLQHEYEQPRMTP-VCPPEKRQRVPSAYNRFIKEEIQRIKANNPEITHREAFSTAAKNWAHLPHIHLGL 95 322.33333334444443335667788999999.78**************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence
MKLQRQQSMA DVAIKDSGSS SRSNRFGLLQ HEYEQPRMTP VCPPEKRQRV PSAYNRFIKE 60 EIQRIKANNP EITHREAFST AAKNWAHLPH IHLGLKLEGN TQAKMDNAVA GGSDKGTQTL 120 GFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	3e-47	YABBY family protein