PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00722.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 608aa MW: 65977 Da PI: 6.3313

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.3	4.2e-30	259	317	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ PIN00722.1 259 SDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILITTYEGTHNHS 317 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
METSLHKSES NCDEESCGEE IVLQVGAGKR VQDDDEKNLK NLNCSNEGQA MTKVGRSSPH 60 ESESRSSSSA TRKQRDIDKL ESAKAEMDEV VEENQRLKMC LDRILKDYRT LEMRYRDVIQ 120 QEARRDPHIV PNTHDHDHHK EESDELIDLS LGISSSDRLK DDHRKTPRNE NLEGGDKEGT 180 LTLGLDCKFE ESKKLLVEAS PNPSPENSLE EVKEDAGDTW PPKAMKNVRD GGDDEISQQN 240 PAKRARVSVK IRCDTPTMSD GCQWRKYGQK IAKGNPCPRA YYRCTVAPSC PVRKQVQRCA 300 EDMSILITTY EGTHNHSLPI SATAMASTTS AAAAMLMSGS STSTTGPSSS STTSVATTNL 360 NGLNFYLSDN SRPKVPFYLP NSSISSSSSY PTITLDLTSS SSSSSSHLTR LGNFPPRYSA 420 TNLNFSSLES NPLPISWSNG VLTYGSQPFN KNLTPASLSF GPQSHETLYQ SYLQKAIPNP 480 SQQSLPPDTI AAATKAITSD PSFQSALAAA LTSIIGSGSS NPTTLGNQNA VEKSSQLNPI 540 KPSEPFPILS SFPSTSNPTK CAPSFLSKSS SSTTISQPSG LTFLSPSFPF LNSKNKSNSP 600 GDNGDHVV

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

METSLHKSES NCDEESCGEE IVLQVGAGKR VQDDDEKNLK NLNCSNEGQA MTKVGRSSPH  60
ESESRSSSSA TRKQRDIDKL ESAKAEMDEV VEENQRLKMC LDRILKDYRT LEMRYRDVIQ  120
QEARRDPHIV PNTHDHDHHK EESDELIDLS LGISSSDRLK DDHRKTPRNE NLEGGDKEGT  180
LTLGLDCKFE ESKKLLVEAS PNPSPENSLE EVKEDAGDTW PPKAMKNVRD GGDDEISQQN  240
PAKRARVSVK IRCDTPTMSD GCQWRKYGQK IAKGNPCPRA YYRCTVAPSC PVRKQVQRCA  300
EDMSILITTY EGTHNHSLPI SATAMASTTS AAAAMLMSGS STSTTGPSSS STTSVATTNL  360
NGLNFYLSDN SRPKVPFYLP NSSISSSSSY PTITLDLTSS SSSSSSHLTR LGNFPPRYSA  420
TNLNFSSLES NPLPISWSNG VLTYGSQPFN KNLTPASLSF GPQSHETLYQ SYLQKAIPNP  480
SQQSLPPDTI AAATKAITSD PSFQSALAAA LTSIIGSGSS NPTTLGNQNA VEKSSQLNPI  540
KPSEPFPILS SFPSTSNPTK CAPSFLSKSS SSTTISQPSG LTFLSPSFPF LNSKNKSNSP  600
GDNGDHVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-71	WRKY family protein