PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00833.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 225aa MW: 25153 Da PI: 4.9153

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.2	9.1e-14	20	66	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+WT eEde+l + v++ G g W+ ++ g+ R+ k+c+ rw +yl PIN00833.1 20 GPWTREEDEILFNFVTRNGHGKWRCLPKLAGLLRCHKSCRRRWMNYL 66 89***************************99**********97 PP
2	Myb_DNA-binding	50.1	6.4e-16	72	114	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg++T+eEde ++++ ++lG++ W+ Ia++++ gRt++++k+ w+ PIN00833.1 72 RGNFTEEEDEAIIRLQAELGNK-WAEIAAELP-GRTDNEIKNVWH 114 89******************.*****.*******997 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MPSQNRGKAT CCDHTELKQG PWTREEDEIL FNFVTRNGHG KWRCLPKLAG LLRCHKSCRR 60 RWMNYLCPDI KRGNFTEEED EAIIRLQAEL GNKWAEIAAE LPGRTDNEIK NVWHHRLKKK 120 ALERNQNLSG LYGGGGLMVE MQSDLISAVY SSGEIWSAAT AAASFGNGLE LELNFEQNHA 180 GDSSSEISQE ASATGSGDDG GSEDPGDMSY DLGESFWKQC LWPEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	3e-55	MYB family protein