PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00945.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 183aa MW: 20908.1 Da PI: 5.5974

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.6	2.5e-28	100	158	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+ k s+ pr+YY+C+ +gC+vkk+ver++ed ++v +tYeg Hnh+ PIN00945.1 100 LDDGYKWRKYGKKMLKTSTQPRNYYKCSNEGCKVKKRVERDDEDHRYVLTTYEGIHNHP 158 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MSGDNYAVFQ EFDPFSCLSA QDPTVNMIST TQEIADISYG SSSSSHNFAC KDFLGPDRDW 60 PSTAQAEGSL TQEHKEDMER TKTGDGYAIT FRTLSEFENL DDGYKWRKYG KKMLKTSTQP 120 RNYYKCSNEG CKVKKRVERD DEDHRYVLTT YEGIHNHPRP SPLYSCDTLL IGWTSQPSSH 180 TLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	5e-33	WRKY family protein