PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00957.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 167aa    MW: 18736.4 Da    PI: 4.8067
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00957.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-083262347
                     -HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                      W++Ia +++ gRt++++k++w+++
       PIN00957.1  3 IWSLIAGRLP-GRTANDVKNFWNTH 26
                     5*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MHIWSLIAGR LPGRTANDVK NFWNTHIEKK INSAGAGLVL GRETKKTITE SNIIRPRPRT  60
FSTLQVPGFP NITDHQQSKP NSENHNDKQQ PSSSTASLSQ DQDTINDSTN DDPDECIRWW  120
SELLKITENG ERTPFSFSNE DYQIILSPGL GDANDYADQD GTFSSYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56650.11e-14MYB family protein