PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00986.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 787aa MW: 89742.9 Da PI: 6.7016

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100	2.4e-31	80	171	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+++g i++r fvC keg+r+ ++k+ +++ +r+r++tr+gCka+l vk +++gkw+v+ +++eHnHel+p PIN00986.1 80 FYNSYARRVGFSTRVSSSRRSRKDGAIIQRSFVCAKEGFRNLNEKRtkDREIKRPRTVTRVGCKASLSVKIQDSGKWVVSGFVKEHNHELVP 171 9*************************************998888545677889*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MENGVIEFDI GLGGGDDGID IEPSNDDGEM PDGSPNDANS LGSGSGDTAF ALQTYIPEGD 60 LDLDPYEGME FESEEAAKAF YNSYARRVGF STRVSSSRRS RKDGAIIQRS FVCAKEGFRN 120 LNEKRTKDRE IKRPRTVTRV GCKASLSVKI QDSGKWVVSG FVKEHNHELV PPDQVHCLRS 180 HRQISGPAKT LIDTLQAAGM GPRRIMSVLI KEYGGISKVG FTEVDCRNYM RNNRQRSMEG 240 DIQMLLDYLK QKQAENPAFF YAVQGDEDQC TGNVFWADPK ARADYNHFGD TVTFDTTYRS 300 NRYRLPFVPF TGLNHHGQPV LFGCAFLINE SEASFVWLFK TWLEAMSGRH PLSITTEHDA 360 VIRSAVMQVF PNTRHRFCKW HIFKQCQEKL SHVLLKHPHF EAAFHKCVNL PESTEEFESC 420 WHSLADKYDL RDHNWLQAIY DDRRQWVPVY LRDTFFAEMS ITQRSDSMNS YFDGYVNAST 480 NLNQFFKLYE KALESRHEKE VKADFDTMNT SPVLKTPSPM EKQASEFYTR KLFVRFQEEL 540 VSTLTFMASK VDDDGEVTTY QVAKFGEDHK PYHVRFNVLE MRATCSCRMF EFSGLLCRHV 600 LAVFRVTNVL TLPSHYILKR WTRNAKSSVI LEERVTDPFN NYLESHTVRY NTLRHDAFKF 660 VDEGAESVES YNVAVAALAE ASQKVALAIK NEGKASMTNG PTRDVSSRGG IQSSHCTGGG 720 QGNSAQQLSE DDMDRKINEL STELERANRK CEVYRTNLLS LLKDIEDHKQ RLSIEVQNIK 780 LSMKDGL

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MENGVIEFDI GLGGGDDGID IEPSNDDGEM PDGSPNDANS LGSGSGDTAF ALQTYIPEGD  60
LDLDPYEGME FESEEAAKAF YNSYARRVGF STRVSSSRRS RKDGAIIQRS FVCAKEGFRN  120
LNEKRTKDRE IKRPRTVTRV GCKASLSVKI QDSGKWVVSG FVKEHNHELV PPDQVHCLRS  180
HRQISGPAKT LIDTLQAAGM GPRRIMSVLI KEYGGISKVG FTEVDCRNYM RNNRQRSMEG  240
DIQMLLDYLK QKQAENPAFF YAVQGDEDQC TGNVFWADPK ARADYNHFGD TVTFDTTYRS  300
NRYRLPFVPF TGLNHHGQPV LFGCAFLINE SEASFVWLFK TWLEAMSGRH PLSITTEHDA  360
VIRSAVMQVF PNTRHRFCKW HIFKQCQEKL SHVLLKHPHF EAAFHKCVNL PESTEEFESC  420
WHSLADKYDL RDHNWLQAIY DDRRQWVPVY LRDTFFAEMS ITQRSDSMNS YFDGYVNAST  480
NLNQFFKLYE KALESRHEKE VKADFDTMNT SPVLKTPSPM EKQASEFYTR KLFVRFQEEL  540
VSTLTFMASK VDDDGEVTTY QVAKFGEDHK PYHVRFNVLE MRATCSCRMF EFSGLLCRHV  600
LAVFRVTNVL TLPSHYILKR WTRNAKSSVI LEERVTDPFN NYLESHTVRY NTLRHDAFKF  660
VDEGAESVES YNVAVAALAE ASQKVALAIK NEGKASMTNG PTRDVSSRGG IQSSHCTGGG  720
QGNSAQQLSE DDMDRKINEL STELERANRK CEVYRTNLLS LLKDIEDHKQ RLSIEVQNIK  780
LSMKDGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein