PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01012.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 361aa MW: 41674.4 Da PI: 8.8973

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	147	1.3e-45	99	233	2	137
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssa......seceaesssssasnsssgkaa 91 +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LG+dk+sktieWL+ ++k+ai elt++ + sec + ++s+s++ +a PIN01012.1 99 TGKKDRHSKICTAQGIRDRRMRLSLQVARKFFDLQDMLGYDKASKTIEWLFSKSKRAIRELTKDhpqA---QkgesfvSEC---E-VVSVSKHD--FNA 188 79************************************************************5432...3333222333...3.33333222..333 PP TCP 92 ksaakskksqksaasalnlakesrakarararertrekmriknkln 137 ++++ k+ ++++a + ++esr kar+rar rt+ekm+ikn +n PIN01012.1 189 PAENYVKSCETKPA-SKSNMRESRDKARERARSRTKEKMMIKNMEN 233 44444444444444.3566789******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MFPPSNSDNP FESLFKRSSF NPSDQNPSSK QELDHHDPPF FFNFPSPFFD ENELPLNQIL 60 LQNHPMNSNP KKKEEQKEMV QKEMVQRRRN LGTIPRRRTG KKDRHSKICT AQGIRDRRMR 120 LSLQVARKFF DLQDMLGYDK ASKTIEWLFS KSKRAIRELT KDHPQAQKGE SFVSECEVVS 180 VSKHDFNAPA ENYVKSCETK PASKSNMRES RDKARERARS RTKEKMMIKN MENSGQWCNI 240 KSNPNDNQHN LDDKKLGFSN IQFEAVDQES KTHNQESVFP YGSADYNSYE DVGTIEKLLG 300 SSNSSSSNSG YVDPNSDFMT FLGNWDVFNC DRTNYMHFAV TNQVSLPGNP SSSFLDTPKF 360 Q

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MFPPSNSDNP FESLFKRSSF NPSDQNPSSK QELDHHDPPF FFNFPSPFFD ENELPLNQIL  60
LQNHPMNSNP KKKEEQKEMV QKEMVQRRRN LGTIPRRRTG KKDRHSKICT AQGIRDRRMR  120
LSLQVARKFF DLQDMLGYDK ASKTIEWLFS KSKRAIRELT KDHPQAQKGE SFVSECEVVS  180
VSKHDFNAPA ENYVKSCETK PASKSNMRES RDKARERARS RTKEKMMIKN MENSGQWCNI  240
KSNPNDNQHN LDDKKLGFSN IQFEAVDQES KTHNQESVFP YGSADYNSYE DVGTIEKLLG  300
SSNSSSSNSG YVDPNSDFMT FLGNWDVFNC DRTNYMHFAV TNQVSLPGNP SSSFLDTPKF  360
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	6e-31	TCP family protein