PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01019.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 130aa    MW: 14532.9 Da    PI: 10.6202
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01019.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.8e-182458135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                Cs C+tt TplWR gp g+k+LCnaCG++y kk++
  PIN01019.1 24 CSDCHTTRTPLWRGGPAGPKSLCNACGIKYNKKRR 58
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MDLKVDKKAD SEEKNHNSSS LKSCSDCHTT RTPLWRGGPA GPKSLCNACG IKYNKKRRQL  60
LGLDTGRSNK KKKRTSVNRS NEVREILKMR FMALGSDMLL QRSGKLMSKL REEEQAAILL  120
MALSCGSVYA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15574KKRRQLLGLDTGRSNKKKKR
25675KKRRQLLGLDTGRSNKKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-34GATA family protein