PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01120.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 237aa    MW: 25934.5 Da    PI: 8.7632
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-1577124355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r ++  g+Wv+eIr+p++   ++r++lg++ ++e+Aa+a++ a+++l+g
  PIN01120.1  77 YRGIR-CR-GGKWVSEIREPRK---TRRIWLGTYPSPEMAAAAYDSAALALKG 124
                 9***9.55.7*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MGQQRRPPPP RQKPCTSFPP PSPPPMKADQ LPHFQPSYGT ELSLPSPKKV KKPTKMSSTA  60
CGGAKPSRAT SRKHAIYRGI RCRGGKWVSE IREPRKTRRI WLGTYPSPEM AAAAYDSAAL  120
ALKGGDAVLN FPDLVSSYPK LSFPSPLDIR RAAASAAEMM RPDGGGADND QLGNDEMAEA  180
YEEIVSNGSE FIDEEALFHM PNLLKDMAEG MLVSPPRMAS PSWDEIPGNY GESLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-47ERF family protein