PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01224.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YB
Protein Properties Length: 276aa    MW: 30693.7 Da    PI: 7.1533
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB172.35.1e-54108202195
       NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                 vreqdrf+Pianv+rim+k+lP +akis+daket+qecvse+isf+tsea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+vyl++yre++g
  PIN01224.1 108 VREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITSEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLHRYREFDG 202
                 69******************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MGNGVARRHK CVVPVNAPQC CPTVNPRSFL TGECPSLVHN ASSPQRDREM ELGGNSNGGF  60
HGYRRLPRTT SDMKAPEISM GLPPPPQTNH HPSAPTANAT TDDNECIVRE QDRFMPIANV  120
IRIMRKILPP HAKISDDAKE TIQECVSEYI SFITSEANDR CQREQRKTIT AEDVLWAMSK  180
LGFDDYIEPL TVYLHRYREF DGGDRGSLRG EPLVKRVVDH GPMGFPGFPP AAFHHMAHHH  240
GFFGPAAPMN FFKDQANAGP SQAQVACIEP FPKEQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.14e-69NF-YB family protein