PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01237.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family BBR-BPC
Protein Properties Length: 94aa    MW: 10329 Da    PI: 10.2034
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind2287.8e-70194208301
   GAGA_bind 208 lPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 +PvPvCsCtG+lr CYkWGnGGWqS+CCtt++S+yPLP+++++r+aR++grKmS++af+klL++LaaeG+dlsn+vDLk+hWAkHGtn+++ti+
  PIN01237.1   1 MPVPVCSCTGVLRPCYKWGNGGWQSSCCTTNLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNAVDLKEHWAKHGTNRYITIK 94 
                 9********************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MPVPVCSCTG VLRPCYKWGN GGWQSSCCTT NLSMYPLPAV PNKRHARVGG RKMSGSAFNK  60
LLSRLAAEGH DLSNAVDLKE HWAKHGTNRY ITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.31e-62BBR-BPC family protein