PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01316.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Dof
Protein Properties Length: 245aa    MW: 26830.7 Da    PI: 8.9589
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.12.3e-393089362
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 + +kcprCds+ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvP+Ggg+rk+k+s+
  PIN01316.1 30 PQPQKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRSK 89
                6889*****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDRESSSQQQ DQQHAPEVIQ VAAHHQQPPP QPQKCPRCDS SNTKFCYYNN YSLSQPRYFC  60
KSCRRYWTHG GTLRNVPIGG GSRKSKRSKT TSSSSSHEIN ARTETLSPAP LPSQNLTAGM  120
ISGQPLRPLP PVGNSIYTGG AFLPSLAATA AVNFRYGANM TLLQGRSLPS LRPHEMAPPP  180
PHQNEFFQSS LVPPRLSSSW TQSLFYSGGG ATSSAADERD QPGSSSFDPD EWSDHNLPGF  240
HHPPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38000.16e-29Dof family protein