PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01386.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 247aa    MW: 27978.7 Da    PI: 6.541
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-18122172255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ a  Aaka+++a+ k++g
  PIN01386.1 122 HYRGVRRRP-WGKYAAEIRDPTRRG--SRVWLGTFDIAVAAAKAYDKAAFKMRG 172
                 8********.**********97665..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MANPAEVSVI EKIRIHLLGE FSPRVLDNDS STSSSLASSV ASSEFDSLYS QLSTWDFGLS  60
IPDNSLFFQQ NQIINSPIIY LTTPKAKPSL HIEVPEAEQK FELIKFECNA AVEEEEDKEK  120
KHYRGVRRRP WGKYAAEIRD PTRRGSRVWL GTFDIAVAAA KAYDKAAFKM RGSKAILNFP  180
VEIQLPDRGA SDVERKRRRE VEEGEFVGFG QLKMGKREAA LKSEITEWEP LTPSFWQLSP  240
HLPIFSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195199RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-24ERF family protein