PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01443.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YB
Protein Properties Length: 147aa    MW: 16970.9 Da    PI: 4.8278
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB165.56.9e-5215110297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eq+r+lPianv+rimk++lP+nakisk+aket+qec+sefi+fvt+eas+kc++e+rkt+ngdd++wal+tlGf++y+ +lk yl +yre+eg++
  PIN01443.1  15 KEQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFIAFVTGEASEKCRKERRKTVNGDDVCWALGTLGFDEYAGSLKRYLDRYREIEGDR 110
                 89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MVDNSEASSS KDMIKEQERL LPIANVGRIM KQILPQNAKI SKEAKETMQE CASEFIAFVT  60
GEASEKCRKE RRKTVNGDDV CWALGTLGFD EYAGSLKRYL DRYREIEGDR GQNRVNNNSE  120
ENNLEENNNS LLYRNNRVER ERDDFVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.12e-57NF-YB family protein