PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01597.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Trihelix
Protein Properties Length: 306aa    MW: 34209.3 Da    PI: 9.4786
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.52.6e-1643126186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  v  L+ea++ +++  +r+klk+++We+v+k++     + +  ++++qCk+k+e+++kry+ + + + +      s++p++++l+
  PIN01597.1  43 EWSEGAVSSLLEAYEAKWTLRNRAKLKGQDWEDVAKYVsaraNSSKSAKTQTQCKNKIESMKKRYRSESAAADG------SSWPLYSRLD 126
                 5*************************************8877777888999****************9999987......4699999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEREHHQTVP KQHENSSSLL SHHQNPKEIL TESPRNDRLK RDEWSEGAVS SLLEAYEAKW  60
TLRNRAKLKG QDWEDVAKYV SARANSSKSA KTQTQCKNKI ESMKKRYRSE SAAADGSSWP  120
LYSRLDLLLR GNGPPPAMTA ELPSVPPPSA PAEPPPAVLE KGSGAQNSRG SDGADRLGKE  180
VGDGNNIGAK LTNDEQEKNQ IADTDSSTPA VYAGKEKSNV KPQWRTKDKA ILKRTREDNW  240
DIGESIRWLA EVMVRSEQAR MDTMREIERM RAEAEVKRGE MDLKRTEIIA NTQLEIAKLF  300
AKGPIG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.18e-86Trihelix family protein