PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01626.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 154aa    MW: 16858.7 Da    PI: 7.4135
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01626.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.1e-152272155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                ++ykG+r++k +g+Wv+eIr+p   g +  r +lg++ ++e Aa a++ a  +l+g
  PIN01626.1 22 KKYKGIRRRK-WGKWVSEIRVP---G-TpERLWLGSYSSPEAAAVAHDVAFYCLRG 72
                59*****998.**********8...3.69************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MSCSSDETAS AYGSSGAEAS QKKYKGIRRR KWGKWVSEIR VPGTPERLWL GSYSSPEAAA  60
VAHDVAFYCL RGNSSPENLN FPLILPAGAR IGMSPRSVQK AASDAGLAID ARLLDAKRGE  120
NLQENGSERS DWRRKSDEEH LSISVEDYIE GPDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.16e-48ERF family protein