PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01702.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 236aa    MW: 26741.5 Da    PI: 10.2798
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM127.41.1e-39151411128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk.kg 97 
                 lp GfrFhPtdeelv +yL++kv +++l++  vi+e+++++++PwdLp  +   +++ +fF+++ +++  +k ++  at+ gyWkatgk+k++++  ++
  PIN01702.1  15 LPIGFRFHPTDEELVIHYLRRKVCSQPLPA-GVIPELEVLQTNPWDLPGDL---KEKRHFFCQKIRRNLMNKCNSTfATDCGYWKATGKNKPIMAPgRN 109
                 699***************************.99***************554...45789****999988766666669*****************8566 PP

         NAM  98 elvglkktLvfykg.rapkgektdWvmheyrl 128
                  ++g+kk++vfy+g ++++g kt+W+mhe+ l
  PIN01702.1 110 FVIGIKKSFVFYQGrTRSRGLKTQWIMHEFCL 141
                 67***********94567899*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MERANSEDGN GGVKLPIGFR FHPTDEELVI HYLRRKVCSQ PLPAGVIPEL EVLQTNPWDL  60
PGDLKEKRHF FCQKIRRNLM NKCNSTFATD CGYWKATGKN KPIMAPGRNF VIGIKKSFVF  120
YQGRTRSRGL KTQWIMHEFC LAASVNSPHL TQKLMVQVGD WVACRVYQWK RKARNQGTAN  180
QVANKNKNKK KPRTLQENNE LGFSISQTSS SSCSSGITEI SSSELDQEAS SQNISF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.18e-48NAC family protein