PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01794.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 239aa MW: 26639.6 Da PI: 9.5872

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	110	2.7e-34	19	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkd.kevlsk.kg 97 p GfrFhPtd+el+ +yL++k+++ +l++ +vi+e+d+++++PwdLp ++++ yfFskr+++ ++ ++ + gyWk+tgk+ k+++ ++ PIN01794.1 19 PIGFRFHPTDQELLLYYLRRKAQSLPLPA-SVIPEFDVFQSNPWDLPG---DSKEKRYFFSKRKRSIIVNNCSSLlRAGCGYWKSTGKEyKPIVGPgSN 113 89*************************.99***********3...356688****988655444435689***963777777555 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++g+kk+Lvf +g+ + g+k++W+mh++ l PIN01794.1 114 LVIGIKKSLVFCEGKISGGRKAQWIMHQFCL 144 569************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MKGLNSEDGN GEGIRIAIPI GFRFHPTDQE LLLYYLRRKA QSLPLPASVI PEFDVFQSNP 60 WDLPGDSKEK RYFFSKRKRS IIVNNCSSLL RAGCGYWKST GKEYKPIVGP GSNLVIGIKK 120 SLVFCEGKIS GGRKAQWIMH QFCLVGAVLT PYLAQKVMIQ VGDWVVCCVY QRKRKARNIG 180 TVTRQVNTDN SQHKQGRMPS DDVEMGFSVS QASSSSSGFT EISSNDLDQE VSSQTCKLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	9e-43	NAC family protein