PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01896.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 361aa    MW: 40837.2 Da    PI: 4.3332
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-195099255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  PIN01896.1 50 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 99
                789******.7*********33....35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MARKRKADEV MDDHQQKLNP GEENSSTWED MVREAAATAA IGGARRARKR FVGVRQRPSG  60
RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGS NTRTNFWPNS STTSVLPSKI  120
TNLLLSRIQA RNNALSSADT NLNSNSNSSS NSSSFESSFV PPVDQNYTVE VPDFSESNFT  180
DFLNDPDEDI SIENCPQEYN PTDVIQVSNE AEAENRIEEE NNSSLEPVDF QFVDNIGSLL  240
DYSPFEITEE ISKPIVQEDE PLMLSEAMKR MNYERKFSAS LYAFNGITEC LRMKLGKNAA  300
ADQISRLRNA CKMKQEEKMM MNKNSEEEKV KKNEDENSLL DEDGELLLWN SIDLPNICYV  360
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-24ERF family protein