PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01980.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 342aa    MW: 37446.2 Da    PI: 9.7542
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.51e-31269326359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh+
  PIN01980.1 269 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 326
                 99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MAVELMMNQN YRNNSFISQS EQNVAQEANS GLQSVEKLIR LFSSKQQKET QLSSSSDDDA  60
GEPKSATEME TDYVAVAEVA VNKFKKVISL LGRTRSGHAR FRRAPVSTSP VSSSSSPNSV  120
LPNIITELPR EEAHDYSTKI YCPTPIQQVP PPDYVKESGS KTISFSYSPV MSRANSFISS  180
LTGGDTETKP SSSSAFQIIG NLSNSAAKPP LSSSSSFKIR KCSSSENAVS GKCSGSSSRC  240
HCSKRRKLRM KRVIRVPAIS MKMADIPPDD YSWRKYGQKP IKGSPHPRGY YKCSSVRGCP  300
ARKHVERALD DPTMLIVTYE GEHNHSLSIA ETVPSAMILE SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.13e-69WRKY family protein