PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01991.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 189aa MW: 21570.9 Da PI: 5.4392

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.1e-09	14	58	2	44
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 rWT eE +l+ d+ ++ + +W++Ia++mg ++++ ++ ++ PIN01991.1 14 SRWTWEENKLFEDCLVDFPDDcpnRWERIAARMG-TKSAAEIEQHY 58 59***************99*********.*******99 PP
2	Myb_DNA-binding	48.1	2.6e-15	111	155	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + +++G+g+Wk+I+r++ + R++ q+ s+ qky PIN01991.1 111 PWTEDEHRLFLVGLEKYGKGDWKSISRYVVLSRSPAQVASHAQKY 155 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MANSGGVDSE TGNSRWTWEE NKLFEDCLVD FPDDCPNRWE RIAARMGTKS AAEIEQHYGL 60 LLEDLMAIEA GSIELPDYPE KTDFLSSSSE PPKNPKSEKK QTGVQRKAAR PWTEDEHRLF 120 LVGLEKYGKG DWKSISRYVV LSRSPAQVAS HAQKYYERQE KEEQNKKRRS IFDNSIAETS 180 SLNSSKFSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	2e-43	MYB family protein