PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02035.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family LFY
Protein Properties Length: 389aa    MW: 43910.3 Da    PI: 6.2081
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY656.63.2e-20013741386
     FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrl 99 
                 mdp+afsaslfkwdpr a  +pp+rlle  a +++pl +a ++  r+l +leelf++yG+ry+t+akiaelGftv+tL+dm+deeld++m+sls+ifr+
  PIN02035.1   1 MDPDAFSASLFKWDPRGAL-PPPNRLLEAVAPPPPPLPTAYSMRPRELGGLEELFQDYGIRYFTAAKIAELGFTVNTLLDMRDEELDEMMNSLSQIFRW 98 
                 9**************9776.889999999999999999999999999**************************************************** PP

     FLO_LFY 100 dllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkk 198
                 dllvGeryGikaavraerrrl+eee  ++rr+lls d+++aldalsqeglseepvq+ekeaagsgg+g   +e+va   +k  ++++k+ k +++  ++
  PIN02035.1  99 DLLVGERYGIKAAVRAERRRLDEEE--ARRRHLLSGDTTHALDALSQEGLSEEPVQQEKEAAGSGGGG--VWEMVAGGGRK--QRRRKNYKGRSRMASM 191
                 ***********************87..99999********************************9999..99999998432..2222222222222222 PP

     FLO_LFY 199 kelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyi 297
                     +e+ded++e+e  +++ ++ +g erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcPtkvtnqvfr+akkaga+yi
  PIN02035.1 192 ----EEDDEDDDETEGAEDD-ENGGGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRFAKKAGANYI 285
                 ....2344444444444444.444577************************************************************************ PP

     FLO_LFY 298 nkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
                 nkPkmrhYvhCYalhcLdee+snalrrafkergenvGawrqacykplvaia+rqgwdida+fnahprLsiWYvPtkLrqLCh+ers+a+
  PIN02035.1 286 NKPKMRHYVHCYALHCLDEETSNALRRAFKERGENVGAWRQACYKPLVAIASRQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERSSAT 374
                 **************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MDPDAFSASL FKWDPRGALP PPNRLLEAVA PPPPPLPTAY SMRPRELGGL EELFQDYGIR  60
YFTAAKIAEL GFTVNTLLDM RDEELDEMMN SLSQIFRWDL LVGERYGIKA AVRAERRRLD  120
EEEARRRHLL SGDTTHALDA LSQEGLSEEP VQQEKEAAGS GGGGVWEMVA GGGRKQRRRK  180
NYKGRSRMAS MEEDDEDDDE TEGAEDDENG GGGERQREHP FIVTEPGEVA RGKKNGLDYL  240
FHLYEQCREF LIQVQNIAKE RGEKCPTKVT NQVFRFAKKA GANYINKPKM RHYVHCYALH  300
CLDEETSNAL RRAFKERGEN VGAWRQACYK PLVAIASRQG WDIDAIFNAH PRLSIWYVPT  360
KLRQLCHAER SSATASSSIT GGGPDHLPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-107LFY family protein