PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02156.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 167aa    MW: 18713.4 Da    PI: 6.0796
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.8e-053153123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ F++   L  H++ H
  PIN02156.1 31 YECNFCKRGFTNAQALGGHMNIH 53
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MEHEKHGNSD ISSPENDQKS NEDSSGVGRS YECNFCKRGF TNAQALGGHM NIHRKDKAKV  60
KAKHKNLQEE PSNVHNIKPN ENYAGSLRYL PDQTNYYRPP SGQVNYQVYL PSSSPSFQTG  120
NYFSVEGTGV DPNLSLRIGI SPPVEDEDTN HVKENEVDLE LRLGHDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.17e-15C2H2 family protein