PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02272.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CPP

Protein Properties

Length: 527aa MW: 58061.2 Da PI: 8.2544

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02272.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.3	3.5e-14	149	188	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k CnCk+s+Clk+YCeCfa g++C+ C+C++C Nk e+ PIN02272.1 149 KQKLCNCKNSRCLKLYCECFATGVYCDG-CNCTNCYNKIEH 188 7899**********************.******9775 PP
2	TCR	51.9	1.5e-16	225	263	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +kkgCnCkks Clk+YCeCf+a+ Cs++CkC dCkN e PIN02272.1 225 HKKGCNCKKSGCLKRYCECFQANIVCSDKCKCMDCKNFE 263 89***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MEQSETAAGT VAAAPVVRQL DFTVNFKAMA NANGNLILPE HPQAQLQSKL LALAQSRLVH 60 APAKSPSPPR MAAQTKLPPR KMVMPPKSPQ RELPQMARQE KSPVIAPRLA HPVKPAPLPK 120 PPLQPLLKTE SPKTRERGNL EQGDGTPKKQ KLCNCKNSRC LKLYCECFAT GVYCDGCNCT 180 NCYNKIEHEA DRKESIDMIL ERNPNAFRPK IASSPHGPAD RGAEHKKGCN CKKSGCLKRY 240 CECFQANIVC SDKCKCMDCK NFEGSEERKA HFHQYSANSM AFIQQTANAA INGAIGTPSK 300 KSRNQQIVFG VESNKQPNQL PQSHKETDPP RSPLSVHPSK PDAATLGLSK SSYRSPLSGI 360 LQLQHVNDFC TLLVEVSAEA ARSLSEEREM MNNSTDLNAA EIPVVSSDEK EDRNQQNAME 420 SCVNQDNRDR TLLCVSDDCG VQDGRPLSPG TLALMCDERD MIFMAANAPS TTTESNTRMN 480 VMSVSTHGLS PLYVEQERLV LMRFRSFLNK LITCGSIEET KIEQAAD

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MEQSETAAGT VAAAPVVRQL DFTVNFKAMA NANGNLILPE HPQAQLQSKL LALAQSRLVH  60
APAKSPSPPR MAAQTKLPPR KMVMPPKSPQ RELPQMARQE KSPVIAPRLA HPVKPAPLPK  120
PPLQPLLKTE SPKTRERGNL EQGDGTPKKQ KLCNCKNSRC LKLYCECFAT GVYCDGCNCT  180
NCYNKIEHEA DRKESIDMIL ERNPNAFRPK IASSPHGPAD RGAEHKKGCN CKKSGCLKRY  240
CECFQANIVC SDKCKCMDCK NFEGSEERKA HFHQYSANSM AFIQQTANAA INGAIGTPSK  300
KSRNQQIVFG VESNKQPNQL PQSHKETDPP RSPLSVHPSK PDAATLGLSK SSYRSPLSGI  360
LQLQHVNDFC TLLVEVSAEA ARSLSEEREM MNNSTDLNAA EIPVVSSDEK EDRNQQNAME  420
SCVNQDNRDR TLLCVSDDCG VQDGRPLSPG TLALMCDERD MIFMAANAPS TTTESNTRMN  480
VMSVSTHGLS PLYVEQERLV LMRFRSFLNK LITCGSIEET KIEQAAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-107	CPP family protein