PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02355.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 238aa    MW: 26107.5 Da    PI: 8.4455
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.5e-1280127454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE++RRdr+N++f eL  ll +    + +K +Ka+iL  Av+ + +L
  PIN02355.1  80 SKACREKQRRDRLNDKFMELGALLEPG---RPPKTDKAAILVDAVRMVTQL 127
                 5678**********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MVSPENTNWL YDYGIEDIHV HDGNFSAPSS GFSWPTQALN GSSNVSNSVE IDGSIGESDV  60
PKETGSKKRA RPEPSAPSSS KACREKQRRD RLNDKFMELG ALLEPGRPPK TDKAAILVDA  120
VRMVTQLRGE AQKLKDSNLN LQEKIKELKA EKNELRDEKQ RLKAEKEKLE QQLKTMNAPQ  180
PGFLPSPPAI PAAFAAQTQG AGNKLVPIIS YPGVGMWQFM PPAAVDTSQD HVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-93bHLH family protein