PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02404.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 95aa    MW: 11289 Da    PI: 10.2097
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+ +++++G  +W++ +++ g+ R++k+c++rw++yl
       PIN02404.1 14 KGAWSEEEDNRLKAYIQRYGHWNWRLLPKYAGLARCGKSCRLRWLNYL 61
                     79******************99*************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MVRPPYVDSN GMNKGAWSEE EDNRLKAYIQ RYGHWNWRLL PKYAGLARCG KSCRLRWLNY  60
LRPGVKRGNF SKQEEDLIRE LHAKLGNKYE TLLHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.21e-37MYB family protein