PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02472.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 623aa MW: 72304.5 Da PI: 9.2801

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.5	9.1e-23	51	139	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn.Hela 90 kfYn+YA+ +GFs+rk++ +k g+i++rtf+C ++g+r+++k++ +++r+etr gC+a+++++ + dgk++v k++ +H+ H+l+ PIN02472.1 51 KFYNDYARAAGFSIRKHTIHKD-IRGRIIDRTFCCACQGHRQKDKRN-AIVKSHRPETRKGCRAMMRINVRFDGKYKVVKFVADHSgHDLV 139 6*************999998.7777*************999.89999******************************768775 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MNVDNGVDFT SRCKLEFSID EANNEKEHLL DNDKTIPKIG MKFDSEEAAY KFYNDYARAA 60 GFSIRKHTIH KDIRGRIIDR TFCCACQGHR QKDKRNAIVK SHRPETRKGC RAMMRINVRF 120 DGKYKVVKFV ADHSGHDLVS PSKTHMLRSH RNISVAQALL ANDIDSSGIT PRAGFALMAK 180 QVGGRENVGF IFEDYKNYLR SKRTVEMKIG DTGGVLEYLQ QKQLDDPNFF YAIQVDEDDL 240 IANILWVDAQ MKADYACFGD VVCFDTTYRK NKEGRPFALF VGVNHHKQTV VFGAALLYDE 300 TTSTFIWLFH TFARAMSGKQ PKTILTDQNA AMAKALALKW PETSHRLCIW HIYQNAVIHL 360 SGVFSHFANF SKDFSSCIYD YDAKDEFLLA WQEMLEKYGL QNNEWMERLF KIREKWALVY 420 GRQTFFADLM TTQRSESMNS VLKRYVSYKH NLLQFFHDFD RLIEDRRYEE LKADLRTSHS 480 TPVASFPIEI TKHAASVYTH EVFELFQNEV HKAYDSKVEL CSESGEIFEY KVTSFKKHYQ 540 HTVYCKKFEF AGILCSHALK VLSSRNIVKI PDIYIKKRWT KKAKKNENQV GRHNLGMKLP 600 SNNFTPQGQR DIVNDRSRDM PKG

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MNVDNGVDFT SRCKLEFSID EANNEKEHLL DNDKTIPKIG MKFDSEEAAY KFYNDYARAA  60
GFSIRKHTIH KDIRGRIIDR TFCCACQGHR QKDKRNAIVK SHRPETRKGC RAMMRINVRF  120
DGKYKVVKFV ADHSGHDLVS PSKTHMLRSH RNISVAQALL ANDIDSSGIT PRAGFALMAK  180
QVGGRENVGF IFEDYKNYLR SKRTVEMKIG DTGGVLEYLQ QKQLDDPNFF YAIQVDEDDL  240
IANILWVDAQ MKADYACFGD VVCFDTTYRK NKEGRPFALF VGVNHHKQTV VFGAALLYDE  300
TTSTFIWLFH TFARAMSGKQ PKTILTDQNA AMAKALALKW PETSHRLCIW HIYQNAVIHL  360
SGVFSHFANF SKDFSSCIYD YDAKDEFLLA WQEMLEKYGL QNNEWMERLF KIREKWALVY  420
GRQTFFADLM TTQRSESMNS VLKRYVSYKH NLLQFFHDFD RLIEDRRYEE LKADLRTSHS  480
TPVASFPIEI TKHAASVYTH EVFELFQNEV HKAYDSKVEL CSESGEIFEY KVTSFKKHYQ  540
HTVYCKKFEF AGILCSHALK VLSSRNIVKI PDIYIKKRWT KKAKKNENQV GRHNLGMKLP  600
SNNFTPQGQR DIVNDRSRDM PKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-136	FAR1 family protein