PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02556.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 190aa    MW: 21891.1 Da    PI: 7.1465
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.8e-064183754
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                e+Er+RR+++ ++  eL +l+        + ++Ka+i + A+ YI +L
  PIN02556.1 41 EAERKRRKKLSDRQLELCSLVLII-----TNMTKATIITDAITYIEEL 83
                89********************96.....68**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MDRVKTEFND LCITEGSKMD KRKNVDQNED EGRKFISKNL EAERKRRKKL SDRQLELCSL  60
VLIITNMTKA TIITDAITYI EELKKTVEEL TDQLRQIKTT CADEEKTNSE EEDIKKWGTM  120
PPEVQVNHIT GTKQWIKIVF QKKRGSLTNV TTSRGASLVT SSAEFAENFP CELPDADQIK  180
KFLLEIIKSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14350ERKRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.11e-28bHLH family protein