PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02557.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 206aa    MW: 23601 Da    PI: 5.4997
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02557.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.6e-094183754
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                e+Er+RR+++ ++  eLr+l+P       + ++Ka+i + A+ YI +L
  PIN02557.1 41 EAERKRRKKLSDRQLELRSLVPII-----TNMTKATIITDAITYIEDL 83
                89*********************6.....58**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MDRVKTEFND LCITEGSKMD KRKNVDQNED EGRKFISKNL EAERKRRKKL SDRQLELRSL  60
VPIITNMTKA TIITDAITYI EDLKKTVEEL TDQLQQMETT CADEEKTNSE EEDIKKWGTI  120
TPEVQVNHIS GTKLWIKIVF QKKRGSLTKL MEAINVLGFD LTDTSITTSR GAILITSSAE  180
FAENFHGGLP DADQIKKFLL EIIRSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14350ERKRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.15e-47bHLH family protein