PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02580.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Dof
Protein Properties Length: 228aa    MW: 24263.2 Da    PI: 6.8657
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.42.1e-402383262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                ++++lkcprCdstntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s
  PIN02580.1 23 EQEHLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNSKRS 83
                57899****************************************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MQDSSLYSQI KTQIQHPHPQ FPEQEHLKCP RCDSTNTKFC YYNNYNLSQP RHFCKNCRRY  60
WTKGGALRNI PVGGGSRKNS KRSSSSSSSS TATSAAAKRP APAVSDHHND NKNASGETKG  120
DNFGGQFGNF MEMSGSFSSL LDSSGAQFGG LMDGLGPNGP NLQISGDFGD SGSGSGQNVG  180
REMGLESGNG NNGDAFLSIE GGGETGSWDG SSNEWPDLAI YTPGSNFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.14e-40Dof family protein