PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02618.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family YABBY
Protein Properties Length: 191aa    MW: 21659.8 Da    PI: 9.1044
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02618.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2014.7e-6231576170
       YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsen 104
                 ++eq+Cy+ CnfCn +lavsvP +slf vvtvrCGhC++l +vn+a a q + ++   +++  ++ +       +++k+   ++++ +++++ +   + 
  PIN02618.1   3 MAEQLCYIPCNFCNIVLAVSVPCNSLFDVVTVRCGHCSNLWTVNMAAAFQCVQVQPSWQDAQGPSYT------PSEYKVDLGSSSKWNNKMAIQP--SM 93 
                 689*******************************************999999999875544444322......2222222222222222222211..22 PP

       YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                 ++++ pr   v+rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl
  PIN02618.1  94 TNKSEPR--IVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIHFGL 157
                 2333344..589****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MDMAEQLCYI PCNFCNIVLA VSVPCNSLFD VVTVRCGHCS NLWTVNMAAA FQCVQVQPSW  60
QDAQGPSYTP SEYKVDLGSS SKWNNKMAIQ PSMTNKSEPR IVNRPPEKRQ RVPSAYNQFI  120
KEEIQRIKAN NPEISHREAF STAAKNWAHF PHIHFGLMLE SNQPTKLNEV LDGKGKGPEK  180
HKMRRTAILN K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.11e-81YABBY family protein