PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02719.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Protein Properties

Length: 824aa MW: 90691.9 Da PI: 7.4889

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.3	1.6e-19	317	417	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 f+k+l+ sd+++ grlvlpk +ae++ +++ e++ ++++d +g++W++++++ +++s++yvl+ G + ++++gD+v+F++ r +++lv+ PIN02719.1 317 FEKILSASDAGRIGRLVLPKACAEAYfpPINQSEGIPIRIQDIKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNMQVQAGDTVTFRR--RdPGGQLVI 412 99************************777788999***********99899999999.*******************4..438998999 PP EEE-S CS B3 95 kvfrk 99 + +++ PIN02719.1 413 GCRKA 417 88765 PP

Sequence ? help Back to Top
Protein Sequence Length: 824 aa Download sequence
MGSNNCMNEV CRGTTSSELK KGWNLKSGGF AKLCYSCGSA YENSVFCETF HREESGWREC 60 RICGKRIHCG CIASKYLHEY MDFGGVACIS CAKRLESRSM QSIQIPGDIH NGTFVTNGIS 120 NVRPQVVGNQ IDDDKFSTER LLQLSKAIGG HDFSSALEQV KQEDSVLKTR QSNKRLLNLA 180 QQSSSSAFLK ADNIRSKDEV KDMYESLALP SLNFSLTTSL GSSSSVPPFA GTEGSEQSKG 240 SFQPGQKARH ILPKPPKPGP TAGLETNKGT VSQTRVARPP AEGRGRSQLL PRYWPRITDQ 300 ELQQLSGDLK STIVPLFEKI LSASDAGRIG RLVLPKACAE AYFPPINQSE GIPIRIQDIK 360 GKEWTFQFRF WPNNNSRMYV LEGVTPCIQN MQVQAGDTVT FRRRDPGGQL VIGCRKATNN 420 IDMQDPQTPA APSGDSPRET SLSGATDNLA SNGGRTSDDS LQRHMSISEK KKARNIKNKR 480 LLMHSDDAME LRITWEEAQE LLRPSPAAKP TVVMVEDHEF EEFEEPPVFG KRTIFTSRSS 540 GEQEQLAQCD SCLKWRRLPV HALLSAKWTC SENIWDSKRC SCSAPEDVNP RDLESFVGVY 600 KDSKKRKISE NKAPKEGEPS GLDALATAAV LGDNISDIAE SSVGATTRHP RHRPGCTCIV 660 CIQPPSGKGK HEPTCKCNVC LTVRRRFKTL MMRKKKRQTD REAEVVQGKE KTSARIGLES 720 DDAPNTNHQD TEINRNGEVD ETNKAQLDLN SDPHREDDVL VDAGGMNLTT LMNAATLPLD 780 AYLGQNGLKP CLGSRAGAET EENVADEGGF ISGDVEKENN GEDG

Sequence ? help Back to Top

Protein Sequence Length: 824 aa Download sequence

MGSNNCMNEV CRGTTSSELK KGWNLKSGGF AKLCYSCGSA YENSVFCETF HREESGWREC  60
RICGKRIHCG CIASKYLHEY MDFGGVACIS CAKRLESRSM QSIQIPGDIH NGTFVTNGIS  120
NVRPQVVGNQ IDDDKFSTER LLQLSKAIGG HDFSSALEQV KQEDSVLKTR QSNKRLLNLA  180
QQSSSSAFLK ADNIRSKDEV KDMYESLALP SLNFSLTTSL GSSSSVPPFA GTEGSEQSKG  240
SFQPGQKARH ILPKPPKPGP TAGLETNKGT VSQTRVARPP AEGRGRSQLL PRYWPRITDQ  300
ELQQLSGDLK STIVPLFEKI LSASDAGRIG RLVLPKACAE AYFPPINQSE GIPIRIQDIK  360
GKEWTFQFRF WPNNNSRMYV LEGVTPCIQN MQVQAGDTVT FRRRDPGGQL VIGCRKATNN  420
IDMQDPQTPA APSGDSPRET SLSGATDNLA SNGGRTSDDS LQRHMSISEK KKARNIKNKR  480
LLMHSDDAME LRITWEEAQE LLRPSPAAKP TVVMVEDHEF EEFEEPPVFG KRTIFTSRSS  540
GEQEQLAQCD SCLKWRRLPV HALLSAKWTC SENIWDSKRC SCSAPEDVNP RDLESFVGVY  600
KDSKKRKISE NKAPKEGEPS GLDALATAAV LGDNISDIAE SSVGATTRHP RHRPGCTCIV  660
CIQPPSGKGK HEPTCKCNVC LTVRRRFKTL MMRKKKRQTD REAEVVQGKE KTSARIGLES  720
DDAPNTNHQD TEINRNGEVD ETNKAQLDLN SDPHREDDVL VDAGGMNLTT LMNAATLPLD  780
AYLGQNGLKP CLGSRAGAET EENVADEGGF ISGDVEKENN GEDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	684	695	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein