PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02825.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 373aa MW: 43246.6 Da PI: 9.3294

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02825.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	129	152	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C Cg++F +++ L +H + H PIN02825.1 129 YVCRVCGRRFYTNEKLINHFKQiH 152 9******************88766 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MLNLAKFPSN FDKFQLFEKI SSLGSILSVP RCSHFTSISS SCSEQRATEN KVAVFWDLDN 60 KPPKSFPPYD AALRLKKAAQ KFGFVKYMIA YANRHAFSYV PPSVRAQRRE KKSLNELETM 120 GVIKPDEPYV CRVCGRRFYT NEKLINHFKQ IHEREQMKRL NQIESARGKR RVNMIAKYAM 180 KMEKYRNAAR DILTPKVGYG LADELKRAGF WVREVSDKPQ VADVALRNQM VDMMDKRIIE 240 CLFLVSDDSD FVNVLKEARL RCLKTVVVGD NNDGTLKRTA DAAFSWQEIM MGKAKKEALS 300 VVGRWKDQNV LQRLEWTYDP EKEKKLYYDE IESEDSDIES FSSSEVGPLI ETENDGAWWE 360 LESRTKDVKR PLE

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MLNLAKFPSN FDKFQLFEKI SSLGSILSVP RCSHFTSISS SCSEQRATEN KVAVFWDLDN  60
KPPKSFPPYD AALRLKKAAQ KFGFVKYMIA YANRHAFSYV PPSVRAQRRE KKSLNELETM  120
GVIKPDEPYV CRVCGRRFYT NEKLINHFKQ IHEREQMKRL NQIESARGKR RVNMIAKYAM  180
KMEKYRNAAR DILTPKVGYG LADELKRAGF WVREVSDKPQ VADVALRNQM VDMMDKRIIE  240
CLFLVSDDSD FVNVLKEARL RCLKTVVVGD NNDGTLKRTA DAAFSWQEIM MGKAKKEALS  300
VVGRWKDQNV LQRLEWTYDP EKEKKLYYDE IESEDSDIES FSSSEVGPLI ETENDGAWWE  360
LESRTKDVKR PLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-142	C2H2 family protein