PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02852.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 261aa MW: 27938.2 Da PI: 10.0431

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.8	2.3e-35	40	126	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 a+k+++++++h kv+gR+RR+R++a+ aar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ +a+ s+s++ ss+g PIN02852.1 40 APKRSSNKDRHKKVEGRGRRIRIPALSAARIFQLTRELGHKTDGETIQWLLQQAEPSIIAATGTGTIPASAITAAGASVSEQGSSAG 126 789******************************************************************999555555555544444 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MERKASKHHQ KIPQDVPTNF SQTNMALGKP EDDNNKKQLA PKRSSNKDRH KKVEGRGRRI 60 RIPALSAARI FQLTRELGHK TDGETIQWLL QQAEPSIIAA TGTGTIPASA ITAAGASVSE 120 QGSSAGLYSK LSETSVPGMG LRPNLSMIGE DMLGRSMGVW PSFSGFGSGI LQNSNVLSSN 180 PTTNLSRVSK HGFQGFDQFP GSVSLGHHVP GLELGLSQEG HIGGLNLQAF TQFYQQIGQN 240 GDCGASSNHH EQDRGKESSQ G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-58	TCP family protein