PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03044.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 754aa    MW: 85866 Da    PI: 7.1171
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS378.86.7e-1163787511374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d  +a++lL+++++++sp gd  qRla+yf+ +L+arla+++s++ kal  ++t+    ++ l+a+ ++   sP+ k+s+++ N
  PIN03044.1 378 LRTLLINCAQAVAADDRYNANELLKKIRQHSSPFGDGSQRLAHYFADGLEARLAGTGSQIHKALVNKRTT---AADYLKAYYTYLASSPFRKISNFASN 473
                 6789************************************************************999998...9************************* PP

        GRAS 100 qaIleavege..ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                 ++I+  ++ +   r+H+iDf+i +G+QWp+L+q +++R++gpp+lRiTg++ p++g   +e++e tg+rLa++A++++vpfe+++ +a+++e++++e+L
  PIN03044.1 474 KTIMMKAKAAkaMRIHVIDFGILYGFQWPTLIQRMSAREGGPPKLRITGIDFPQPGfrPAERIEDTGRRLAHYAKTFNVPFEYKA-IAQKWETIKIEDL 571
                 ***998887755899****************************************9*****************************.7************ PP

        GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                 +++++E ++Vn+ ++ ++llde+v  es+r+ vL+l+++++P+++++   +  ++++ F++rf e l ++salfd+le+++p+++ er+ +Er ++gre
  PIN03044.1 572 KIEKDEFVVVNCLYRTKNLLDETVVAESARTMVLNLIRKINPDIFIHGIVNGAYSAPFFVTRFREVLFHFSALFDMLETNVPPDKPERMLIERDIFGRE 670
                 *************************************************************************************************** PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + nv+aceg er+er et+++W+ r  +aGF ++p++ + ++ ak+ +r+++ + + ++e+s++l++gWk+r+++++S+W+
  PIN03044.1 671 ALNVIACEGWERVERPETYKQWQVRDLRAGFMQIPFEREFMDRAKYKVRTFYHKDFVIDEDSQWLLMGWKGRTIFAISCWK 751
                 ****************************************************889*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    
MDPRFRGFLN SSNGVQMGNQ SMAENGTTFG ITYPDQKLVN GHTNQSSSLP VHSIGGVPLH  60
ANEPFSNGNV PKSFDIEDDY QEDCDFSDEI LRYIDQMLME EDMDDKIHML QESLDFQAKE  120
KSFYEVLGKK YPPSPQQESA LSSGYGETAH GFPSYVNHYN LTSSTNDCSG YLIDIVDPSW  180
SSSRMDSRVC CHTTYNVSNS SISSSNSLSN VMDGFSDSPI SPLQIRDMYS ESQPAWNFRK  240
GLEEASKFLP SGSKLLVNVG INGSLPKEGN VKEEKDDVKR PPSESRVRKN RHIADTDLEE  300
ERSSKLPAVY SESNVPEEEF DEVLLHTMGE AEKKFAAYRE ILQNEASKNV QRNRQIKGSG  360
GGRGRGKKQN KKKEVIDLRT LLINCAQAVA ADDRYNANEL LKKIRQHSSP FGDGSQRLAH  420
YFADGLEARL AGTGSQIHKA LVNKRTTAAD YLKAYYTYLA SSPFRKISNF ASNKTIMMKA  480
KAAKAMRIHV IDFGILYGFQ WPTLIQRMSA REGGPPKLRI TGIDFPQPGF RPAERIEDTG  540
RRLAHYAKTF NVPFEYKAIA QKWETIKIED LKIEKDEFVV VNCLYRTKNL LDETVVAESA  600
RTMVLNLIRK INPDIFIHGI VNGAYSAPFF VTRFREVLFH FSALFDMLET NVPPDKPERM  660
LIERDIFGRE ALNVIACEGW ERVERPETYK QWQVRDLRAG FMQIPFEREF MDRAKYKVRT  720
FYHKDFVIDE DSQWLLMGWK GRTIFAISCW KPVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein