PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03196.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 306aa    MW: 33392.5 Da    PI: 4.7647
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03196.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00041279302123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 ++C+ C+++F +   L++H +  H
  PIN03196.1 279 HTCKSCNRTFGSEKALESHSKAkH 302
                 79*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEFWGAEVKS GEPLRVSSGD GRVLHLSQAC LGELKKEKGT ETVYLFVNVD GKRLVLATLF  60
TDKSPQQQFD LVFDRDFELS HNWKSGSVYF CGYKVNGPSE EDESPEEESD ESESEEDIPL  120
TIANNGKPEL KPKKEKPSEA KKANAAKDKE SDAGKQKVKI VEPNKDAKPE EDEESSDEDL  180
MSEDGDEDDS EDEGDSDNSD DESVESDEET PKKAEPSKKR AAESATKTPV QQKKAKVTPQ  240
KSDGKKVGVH VATPHPAKQA GKTPANKPNQ QTPKSGGSHT CKSCNRTFGS EKALESHSKA  300
KHAGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.25e-31C2H2 family protein