PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03289.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ARR-B
Protein Properties Length: 663aa    MW: 72939.6 Da    PI: 5.2881
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.66.6e-29203256155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr++W+ eLH++Fv av+qL G+ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  PIN03289.1 203 KPRVVWSIELHRKFVAAVNQL-GIEKAVPKRILDLMNVEGLTRENVASHLQKYRL 256
                 79*******************.********************************8 PP
2Myb_DNA-binding37.84.4e-12205255148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+ +g+t++++ s++qky+
       PIN03289.1 205 RVVWSIELHRKFVAAVNQLGIEkaVPKRILDLMNvEGLTRENVASHLQKYR 255
                      678***********************************************7 PP
3Response_reg79.41.2e-26221301109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+p+ ++ll ++l+k +y +v+++++++ al++l+e++   Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++++++ + +  Ga 
    PIN03289.1  22 VLAVDDDPTCLMLLDTLLKKCQY-HVTSTSHARVALKMLRENKdrLDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDPKLVMKGVTHGAC 116
                   799********************.***************888889*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l+Kp+ +eel++
    PIN03289.1 117 DYLVKPVRIEELRN 130
                   ************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 663 aa     Download sequence    
MTVEKITGDN ENLDNFPVGL RVLAVDDDPT CLMLLDTLLK KCQYHVTSTS HARVALKMLR  60
ENKDRLDLVI SDVHMPDMDG FKLLELVGLE MDLPVIMLSA NSDPKLVMKG VTHGACDYLV  120
KPVRIEELRN IWQHVIRRKK FDSKNQNKSA DQLNSNRTSG EGQGNQMTSN ADQNGKFNRK  180
RKDEEDENED NGNESEDPAT QKKPRVVWSI ELHRKFVAAV NQLGIEKAVP KRILDLMNVE  240
GLTRENVASH LQKYRLYLKR ISSVATQQAN MVAAFGVKDS PFMRIGPFEG LGDFRSLAGP  300
GRLANAALSP YTTGGMLGRL NSPANVNLQN LTPSALIQPQ NLSDSINPLG KMHPVPPSAN  360
QNPSLFQGSP SSLELDQLQQ NKCATGIVNF NAVDNSRMQT ARTISSSDSM VTGAPGNNPM  420
MLRGNYQQSL SGGGFPNQPS HNTVSFNPDS FNLLNGGIIQ SSQMQQPNSL LSTEPLHSQR  480
ATNSTQENNF SNGFYLQNNP IFISSTSMAL PLDDSRDMQC QEGLVGDIQN ITQTPSQSWG  540
EQGQSYGQNS ELTFSSLNAH APSSQSLDQG SGILNEKMGN FVNGRLGGGA STLMQQNENE  600
ATESRARSNE NFLLEQPKVT GGFVPRTYDS LDDMMNAMIK REQDETIPNC DFGFDDYSFG  660
PSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-131ARR-B family protein