PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03310.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 527aa MW: 57845.1 Da PI: 6.3531

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.3	8.8e-16	321	367	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq PIN03310.1 321 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 367 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MNHCVPDFNE MEEDYSIPTP SGYPRPKKPA TGEEEIMELL WQNGQVVMQS QNQRPLKKIT 60 FGGGSVGGDV VNPGEREIRS SSEEQHHLFM QEDEMASWLQ YPLDDSSFDR DLYADLLYSA 120 PPPPTPITTV THPKPVAEIR PPPAPPRPPI PPAVTKPDNP PRLQNFVHFS RLPSRPRTEP 180 MNRPSITTTI ESTVVESNET PAVGPSSRVS HRVADSRTQV NTESGTATAG GTSAATGELA 240 AATFDLTVTS SPGGSGASFS ASGEPSQPPQ KPPPPSEDRK RKAREADENE CQSEDIEFEA 300 AEAKKQTRGS SSTKRSRAAE VHNLSERRRR DRINEKMRAL QELIPRCNKS DKASMLDEAI 360 EYLKSLQLQV QMMAMGCGIV PMMYPGMQHY MPVMGMGMGM GMGMDMGMNR PMVSYPPMMP 420 GSGMPNPAAA AHMAQRFPMP PFHMPPVHVH DPSRIQTPNQ PDPLPNPLGS HNPNQPRMPN 480 FADPYQQFLG LHQPQLPLPQ NQAVVQPGAN KASTSKDISN HDNQQTG

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MNHCVPDFNE MEEDYSIPTP SGYPRPKKPA TGEEEIMELL WQNGQVVMQS QNQRPLKKIT  60
FGGGSVGGDV VNPGEREIRS SSEEQHHLFM QEDEMASWLQ YPLDDSSFDR DLYADLLYSA  120
PPPPTPITTV THPKPVAEIR PPPAPPRPPI PPAVTKPDNP PRLQNFVHFS RLPSRPRTEP  180
MNRPSITTTI ESTVVESNET PAVGPSSRVS HRVADSRTQV NTESGTATAG GTSAATGELA  240
AATFDLTVTS SPGGSGASFS ASGEPSQPPQ KPPPPSEDRK RKAREADENE CQSEDIEFEA  300
AEAKKQTRGS SSTKRSRAAE VHNLSERRRR DRINEKMRAL QELIPRCNKS DKASMLDEAI  360
EYLKSLQLQV QMMAMGCGIV PMMYPGMQHY MPVMGMGMGM GMGMDMGMNR PMVSYPPMMP  420
GSGMPNPAAA AHMAQRFPMP PFHMPPVHVH DPSRIQTPNQ PDPLPNPLGS HNPNQPRMPN  480
FADPYQQFLG LHQPQLPLPQ NQAVVQPGAN KASTSKDISN HDNQQTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	326	331	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.1	2e-41	bHLH family protein