PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03383.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 231aa    MW: 26052.4 Da    PI: 9.6832
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.9e-051211551554
                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +i ++++ L++l+ +      +K + a++L +A+eYI+ L
  PIN03383.1 121 QISQRISALQQLVSPY-----GKTDTASVLLEAMEYINFL 155
                 899***********99.....9***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVFFSFSFLK IKLCFHKSSP LHKYNYKIHF LKTPSTSPVL SLFLPFKKLS TFGVSVCVMC  60
VEWKNIHADR YPETWNRIKA AEKMMQHKRS LISVDQSSVV NLMPKRVKND VSLSSKEKKE  120
QISQRISALQ QLVSPYGKTD TASVLLEAME YINFLHDQVK VLSAPYLYCT PTQTQGEEPC  180
SLKAKGLCLV PISFTEGVVS SNGADIWAPI KTSPQCSRRS ILDEASVITH G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.39e-53bHLH family protein