PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03408.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 159aa MW: 17897.8 Da PI: 9.0987

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03408.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00014	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H PIN03408.1 56 FSCNYCRRKFYSSQALGGHQNAH 78 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MNYDHQPNTS LNLSLSSRNN NNHLINLDLA LVDPASSSPN YSSSPPSNPA EQLRVFSCNY 60 CRRKFYSSQA LGGHQNAHKL ERTLAKKSRE FSSAVKPHSV MGLNRPGRVN GPVIGLEDHV 120 GRFGRREINN YAHDEYITGH ESRVHQEDQF SQLDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	3e-22	C2H2 family protein