PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03463.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 688aa MW: 79728.2 Da PI: 6.8056

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.2	6.8e-24	70	161	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke +w+++++++ HnHel PIN03463.1 70 EYYSSFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVDHPRDRKSVRCGCDAKLYLTKEIvdgVPQWYISQFSNVHNHELL 161 69******************8888.***************************************98755568***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MAVKPLHNVW IRRQQCPCGD WKCYIKYEGD DQSTVASQSI KSELSSLSSQ EVVFNPYVGQ 60 IFKTDDEAFE YYSSFARKNG FSIRKARSTE SQNLGVYRRD FVCYRSGFNQ PRKKANVDHP 120 RDRKSVRCGC DAKLYLTKEI VDGVPQWYIS QFSNVHNHEL LEDDQVRLLP AYRKIEEADQ 180 ERILLLSKAG FPVNRIVKVL ELEKGVQPGQ LPFIEKDVRN FVRSCKKTVQ ENDTMLIMKR 240 DNDLLELLEA CKVAAERDEG FVYNFTMDDN GKVENIAWTY GDSIRAFSLF GDVVTIDTSY 300 RSITYGMILG MWFGIDNHGR PIFFGCTLLQ DETSKSFLWA LQVFVQFMRG RRPQTVVTDM 360 DSGLQDALRI EMPSAKQIIC IWQVLSRMSS WFSPQLGVQY SSFKSEFDVL CRLENVEDFE 420 HQWNHLVAQF GMSSDKHISL LFSCRTSWPF CYVRNFFLAH RMTPEYYKSV EIFLKSVLSV 480 QSSLLCFFEQ VHTAANFGSE KMGELLYLPT KTCLPLEEHA RAILTPFAFS ALQHEIMLSM 540 QYAITEMADG SYLVRHYKKM ERECLVIWIP DDEQVHCSCK ELEHSGILCR HSLRVLVAKN 600 YFQIPEKYFL LRWRLESSLI PLDGQMITNG NNECSQTFHS LTASLFSESF VSKERFDFVH 660 AELTQLLDHV RNMPVSDRSI SPNNIIKS

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MAVKPLHNVW IRRQQCPCGD WKCYIKYEGD DQSTVASQSI KSELSSLSSQ EVVFNPYVGQ  60
IFKTDDEAFE YYSSFARKNG FSIRKARSTE SQNLGVYRRD FVCYRSGFNQ PRKKANVDHP  120
RDRKSVRCGC DAKLYLTKEI VDGVPQWYIS QFSNVHNHEL LEDDQVRLLP AYRKIEEADQ  180
ERILLLSKAG FPVNRIVKVL ELEKGVQPGQ LPFIEKDVRN FVRSCKKTVQ ENDTMLIMKR  240
DNDLLELLEA CKVAAERDEG FVYNFTMDDN GKVENIAWTY GDSIRAFSLF GDVVTIDTSY  300
RSITYGMILG MWFGIDNHGR PIFFGCTLLQ DETSKSFLWA LQVFVQFMRG RRPQTVVTDM  360
DSGLQDALRI EMPSAKQIIC IWQVLSRMSS WFSPQLGVQY SSFKSEFDVL CRLENVEDFE  420
HQWNHLVAQF GMSSDKHISL LFSCRTSWPF CYVRNFFLAH RMTPEYYKSV EIFLKSVLSV  480
QSSLLCFFEQ VHTAANFGSE KMGELLYLPT KTCLPLEEHA RAILTPFAFS ALQHEIMLSM  540
QYAITEMADG SYLVRHYKKM ERECLVIWIP DDEQVHCSCK ELEHSGILCR HSLRVLVAKN  600
YFQIPEKYFL LRWRLESSLI PLDGQMITNG NNECSQTFHS LTASLFSESF VSKERFDFVH  660
AELTQLLDHV RNMPVSDRSI SPNNIIKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein