PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03499.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family FAR1
Protein Properties Length: 214aa    MW: 24364.6 Da    PI: 8.6384
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03499.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.17.1e-1948133290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fY+eYA ++GF +r+ +s+ks+r+g+i++r + C +  + +++ +    ++   ++ r +C+a++ vk+e+ g+w+v k++ eHnH+l+
  PIN03499.1  48 FYDEYAGRAGFLTRVLSSRKSERDGSIISRGLGCRNILNIQKSGDI---SNDLGEKRRDSCTAMFLVKRESAGRWVVRKFVREHNHPLV 133
                 9*********************************998888777666...6778888999****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MNVEDTLDGG HEMIEASIVG DLTSCEAERN AEPCEGMTFE SEAAARAFYD EYAGRAGFLT  60
RVLSSRKSER DGSIISRGLG CRNILNIQKS GDISNDLGEK RRDSCTAMFL VKRESAGRWV  120
VRKFVREHNH PLVVSLPKRR PTFDEKDKKI QELTAELRVK KRLSAAYREQ LLILMKDVEN  180
HNDHLTSKVQ LIRNNLKELE ARRQELSNHN KPGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-54FAR1 family protein