PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03501.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 1004aa MW: 110281 Da PI: 5.7432

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03501.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.8	5.1e-29	606	657	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ PIN03501.1 606 AEKHVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 657 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1004 aa Download sequence
MEYPFSSKEN GNDHLSLPRF GVEGKATGSR DNDLQGSNFG ESFSNVAELM NFDAYAGWCN 60 SPGSLADQMF PLFASSPHNA VSTNFTDLDG LNFMHQYDSG ISMVDGDIME RLCTNGDKMM 120 FHHMDSQLPF ATNSADGGFD LIEMRGKSSK QHDQAGDVVK GVIPRPLMQS LAEKMLRALD 180 LFKEWSGGGI LAQMWVPIKN GDQFVLSTFE QPYLLDQTLS GYREVSRLFT FAAESKPGSF 240 PGLPGRVYAS KIPEWTSNVM YYSKAEYLRV QHAADHEVRG CIALPVFEDD SRESSCCGVL 300 ELVTMKEKSN FDSEMENVCR ALQAVNLRST VPPRLYPQSL SKNQRAALAE ITDVLRAVCY 360 AHRLPLALTW IPCSYIEAPG NETIKIHARG CNRNANEKCV LCIEDTACYV NDKDMRGFVH 420 ACVEHYLQEG QGIVGKALQS NHPFFDPDVK EYHVSEYPLV HHARKFGLNA AVAIRLRSVY 480 TGDDDYILEF FLPVNMKGST EQQLLLNNLS STMQRICKSL RTVSDTELLG MEDSKGKIQD 540 VEMRKPAMSL SRRSSEQSLM SGNLSSINPL TQNASESNTG GMEGDGPHEQ TMAGSRKLME 600 KKRSTAEKHV SLSVLQQYFS GSLKDAAKSI GVCPTTLKRI CRQHGISRWP SRKINKVNRS 660 LRKIQSVLDS VEGVEGGLKF DPTLGGLVGA GSIIQEFDSR KSVALPNKSH SIKDSDLASQ 720 NEKSAPTSSC MDIETNVVKV EEECLLDGNQ VAGERNPGPY HLQSPEKSGV AAFDAGPAWP 780 ASVDNVPWST FPKVPPSSFL SRKESTSNRW VLGDGSMKPV ASKAPLIPGN SRSIAGGDEI 840 ASKLKDYNDD GIVEHNQPTS SGVMDSSNGS GSASMMNGSS STSGSFGKRE NPKCETSCGD 900 SGSKIIVKAT YKDDMIRFKF EPSDGCVQLY EEIAKRFRLQ IGLFQLKYLD DEEEWVMLVS 960 DSDLQECLEV LDFLGTRNVR FLVRDVPSTV GSSGGSNCFL GDGS

Sequence ? help Back to Top

Protein Sequence Length: 1004 aa Download sequence

MEYPFSSKEN GNDHLSLPRF GVEGKATGSR DNDLQGSNFG ESFSNVAELM NFDAYAGWCN  60
SPGSLADQMF PLFASSPHNA VSTNFTDLDG LNFMHQYDSG ISMVDGDIME RLCTNGDKMM  120
FHHMDSQLPF ATNSADGGFD LIEMRGKSSK QHDQAGDVVK GVIPRPLMQS LAEKMLRALD  180
LFKEWSGGGI LAQMWVPIKN GDQFVLSTFE QPYLLDQTLS GYREVSRLFT FAAESKPGSF  240
PGLPGRVYAS KIPEWTSNVM YYSKAEYLRV QHAADHEVRG CIALPVFEDD SRESSCCGVL  300
ELVTMKEKSN FDSEMENVCR ALQAVNLRST VPPRLYPQSL SKNQRAALAE ITDVLRAVCY  360
AHRLPLALTW IPCSYIEAPG NETIKIHARG CNRNANEKCV LCIEDTACYV NDKDMRGFVH  420
ACVEHYLQEG QGIVGKALQS NHPFFDPDVK EYHVSEYPLV HHARKFGLNA AVAIRLRSVY  480
TGDDDYILEF FLPVNMKGST EQQLLLNNLS STMQRICKSL RTVSDTELLG MEDSKGKIQD  540
VEMRKPAMSL SRRSSEQSLM SGNLSSINPL TQNASESNTG GMEGDGPHEQ TMAGSRKLME  600
KKRSTAEKHV SLSVLQQYFS GSLKDAAKSI GVCPTTLKRI CRQHGISRWP SRKINKVNRS  660
LRKIQSVLDS VEGVEGGLKF DPTLGGLVGA GSIIQEFDSR KSVALPNKSH SIKDSDLASQ  720
NEKSAPTSSC MDIETNVVKV EEECLLDGNQ VAGERNPGPY HLQSPEKSGV AAFDAGPAWP  780
ASVDNVPWST FPKVPPSSFL SRKESTSNRW VLGDGSMKPV ASKAPLIPGN SRSIAGGDEI  840
ASKLKDYNDD GIVEHNQPTS SGVMDSSNGS GSASMMNGSS STSGSFGKRE NPKCETSCGD  900
SGSKIIVKAT YKDDMIRFKF EPSDGCVQLY EEIAKRFRLQ IGLFQLKYLD DEEEWVMLVS  960
DSDLQECLEV LDFLGTRNVR FLVRDVPSTV GSSGGSNCFL GDGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein