PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03586.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 78aa    MW: 9154.2 Da    PI: 10.0067
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.89.4e-122767345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      ++++E+ l+++  ++ G + W++Ia +++ gRt+ ++k +w+
       PIN03586.1 27 EFSEDEEALIIRMYNLVGER-WSLIAGRIP-GRTADEVKKYWR 67
                     69******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MASSENSSCD HSVSRSREKN RKESQVEFSE DEEALIIRMY NLVGERWSLI AGRIPGRTAD  60
EVKKYWRSRY PTRSTTRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.18e-18MYB_related family protein