PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03688.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 178aa    MW: 20410.1 Da    PI: 10.2737
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.35.3e-2257252128
         NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 + ++kewyfF+kr +k +++ r+nr+t sg+Wkat +     +     +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  PIN03688.1   5 NVGDKEWYFFCKRGRKFRNSIRPNRVTGSGFWKATVR-----D----CIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 72 
                 56899****************************9966.....3....69**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MESINVGDKE WYFFCKRGRK FRNSIRPNRV TGSGFWKATV RDCIGLKKSL VYYRGSAGKG  60
TKTDWMMHEF RLPATHDKTT KPVDAKGIIA QEAELWTLCQ IFKRNVPYRK CILDWRSEPT  120
TKRSTTISPV DANSKTCSID SSNQNNYNII NFSAPVITQT QTPANQHYFS SHFSSPNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-52NAC family protein