PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03695.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family WRKY
Protein Properties Length: 512aa    MW: 55277.9 Da    PI: 7.43
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY110.57.5e-35229285259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers  d++++ei+Y+g+Hnh+
  PIN03695.1 229 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSL-DGQITEIIYKGQHNHP 285
                 8****************************************.***************8 PP
2WRKY107.56.4e-34399457159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+a+dpk+v++tYeg+Hnh+
  PIN03695.1 399 LDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERAASDPKAVITTYEGKHNHD 457
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MADNKPPPPP SSSKPPPSIT LPPRSSIENL FTGGAGASPG PMTLVSSFFA ENDPDNDCRS  60
FSQLLAGATS SPAAVPNVSR GFTGPAESMG GGGGSGEFVF QQSRPAGLAV SQSQGMFTIP  120
PGLSPASLLD SPGFFSSSQG PFGTSHQQML AQITAQAQAQ GQMQIQYPSL SAASASSFAQ  180
LHPHPSNASL QQRIPPPQPD PKIMKESSDI SLADQRPQPS NFTVDKPTDD GYNWRKYGQK  240
QVKGSEFPRS YYKCTHPNCP VKKKVERSLD GQITEIIYKG QHNHPPPSKR TKDTGNANGT  300
MNPHGSSEFG TEGQMGNLNR PKEGGHLQES SQVTPEHVSG SSDSEEAGDA ETKADGRDED  360
EPESKRRNIE VQNAEQASSH RTVTEPRIIV QTTSEVDLLD DGYRWRKYGQ KVVKGNPYPR  420
SYYKCTTPGC NVRKHVERAA SDPKAVITTY EGKHNHDVPA AKTSSHSTAS AASQLRPQNP  480
VVDRSMADRR TEFGNNEQQP VALLRFKEEQ IT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-144WRKY family protein