PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03959.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 237aa    MW: 26527 Da    PI: 8.4758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.7e-1364109353
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                 r+h+e+E+rRRdriN  +++Lr+l+Pk+     +K++Ka+ L ++v+++++
  PIN03959.1  64 RSHSEAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLGHVVNHVRE 109
                 78*************************8.....8************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MENCFCPQEY SSDNTLMVPW LPPGDAAAPP LQYHWYPQAA VVPQPWASPP FEGAAEDRTA  60
SGSRSHSEAE KRRRDRINAQ LATLRKLIPK SEKMDKAALL GHVVNHVREQ SKRAKEVSKI  120
STIPTEIDQI TIDYINAEET TSQDNQNIYM KASICCEDRE QVFAELNRAL KELGVTIVQA  180
EITSVGGRMN TNFILCAKDS SNNSLKQSLK LALNRVLLSS AQSSFSARSK RQRFFLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.13e-37bHLH family protein